| Protein: | srxa-12 |
| Organism: | Caenorhabditis elegans |
| Length: | 310 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srxa-12.
| Description | E-value | Query Range |
Subject Range |
|
|
234.0 | [0..1] | [287..114] |
|
Region A: Residues: [1-310] |
1 11 21 31 41 51
| | | | | |
1 MVLLFYILFS LMMFTALCIS LILMISVYTY KRKDQLPVVY IYLMIACSIG CCFVEFQSDI 60
61 IPYFMKRKAY MWMYSNLGES FTLFDTFVYI YPMFLTVLMV SERIYCILYP FGKAFTNKKL 120
121 WCYCFLIAIV LLSILLIPFF GGCADNYSFY DFDYTSECEP DNHIVTYIID NYSRLFPVLC 180
181 LFLNIGIILY LSKRRKKMEN PAMKKLRTRQ SHDRTLLIQS IAATIFLLIY EIMDTLTDFF 240
241 SDYFDALPTF TQRVIYYLQA GIVAYTGFFI YFVCTSSTRQ IVIEQVARLF GRKRMQQGRT 300
301 GLSIRDVSTF
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
