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View Structure Prediction Details

Protein: olrn-1
Organism: Caenorhabditis elegans
Length: 561 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for olrn-1.

Description E-value Query
Range
Subject
Range
olrn-1 - status:Partially_confirmed UniProt:Q93174 protein_id:CAB01856.2
980.0 [0..21] [561..14]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNLARKLAA EYIREIVFFR EETTEKSGRK SPKSPIECRK LSKAPPLCCK NGEECKVAGN  60
   61 CVCKPPKPTG PNDEKPTSSR ETYDVFLGGS CGTTVWRRQS VIPFLKKRGI TYYDPQRSFW 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-271]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SENMIYEESI AKESSSLFLF VIDPATVNAT SFLEIAYFAA RKSPKLVVVF LGKTEWAEKA  60
   61 HPDDLPDRNR TCQLLDRILE CHQVPMLHTI PDALEFIEEE MLGRQSLTEA MRSKNNRLPY 120
  121 LQIRARRVVR NVKSLAAQTI KVCKNYATKT V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [272-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTGLIDLTVL LSISFAFPAL PLFYILVPLL MLNIVFFGVI YKVQELRKRY PRMIADSSAV  60
   61 MYHATAAIPS PRVTLKATNV NGTISSKTLV RRRSKQNFEK FFPDDSGASS FIVPSSFLPK 120
  121 QHETKVNIDC SVVELCSSSP DDNSWVQELA APTLDGK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [429-561]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTPYSYVLAT PNFQLDNRMN CLRTWFHHHK KFFYYIPSTT TFLSGMVEIA YILGHTNWEG  60
   61 TVCVPATSQI LEGPDDMTAD EKDHARAARR RRNDCYQIAF CYLKDMAKRR QCRVFTDIGV 120
  121 AVKALVDPAI RGV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle