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View Structure Prediction Details

Protein: bus-17
Organism: Caenorhabditis elegans
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bus-17.

Description E-value Query
Range
Subject
Range
gi|62088614 - gi|62088614|dbj|BAD92754.1| beta-1,3-N-acetylglucosaminyltransferase bGnT-5 variant [Homo sapiens]
250.0 [0..7] [336..5]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPLRIVVRY CVQSILHKEL FLISPIKLFI LCFSWVIPYL LFANYLESCL LPLRVLCYTQ  60
   61 SDLLSTEPRD PDFQTCVNKF FPNREADPEN CKLDKIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVLIRPDLPE YPKRILVIRS GPGSLDYRNF IRRTWKQQVE TLVPVVFVCA TSKNDTLKIE  60
   61 ANKYRDILQF DFEDSYHNLS WKMMAIYGFV IDQLPSVDQI VVTNDDTIVN ATALEQVLHM 120
  121 KKGPVMLGKV SRGYPRIFLP WLTWHVPSEM YPNLCYPLFV QGSSFVLSKD GAKLLVENVC 180
  181 KVPMVHLDDV FMGVLSNCVG LGLIHNEGFD KHSFDDFVVY HYQYSRHSAK YLESLWQNSK 240
  241 MIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2j0aA
Description: No description for 2j0aA was found.

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Created and Maintained by: Michael Riffle