| Protein: | hke-4.2 |
| Organism: | Caenorhabditis elegans |
| Length: | 462 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hke-4.2.
| Description | E-value | Query Range |
Subject Range |
|
|
220.0 | [0..55] | [462..269] |
|
Region A: Residues: [1-140] |
1 11 21 31 41 51
| | | | | |
1 MLVKSCIFLS FLAIAAYGQA HLKYTKEMND PEYVQQNVHH QGHGHAHGGH GHAHDADGGC 60
61 PYAKAAAAEA ATAAAHDHGH AHDHDHGHAH DHGHAHDHHG HSHDEEEDHH HGHAHDHHGH 120
121 SHEDHGHSHG AESAKQVGDE
|
| Detection Method: |  |
| Confidence: | 1.14 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [141-275] |
1 11 21 31 41 51
| | | | | |
1 YQYTGFLSFL NDAKTRLWVY AISATLLISA APCFILMFIP IQANTSESGP LLKVLLAFGS 60
61 GGLLGDAFLH LIPHATPAGD GHGHSHSHGH SHGGGGHSHG AHDMSVGGWV LGGIIAFLTV 120
121 EKLVRILRGE DGHGH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-462] |
1 11 21 31 41 51
| | | | | |
1 SHGHSHGGEK KETKEKDSKD KVAKKEEKPE KDEQSIKVTA YLNLAADFTH NFTDGLAIGA 60
61 SFIAGTTVGI VTMITVLVHE VPHEIGDFAI LIQSGYSKKK AMLIQLVTAL GALSGCVISL 120
121 FSADADALAD AAASSWVLPF TAGGFIYIAT VSVIPELLEN SSFFQTVKEI FAILTGIFLM 180
181 YLIAIYE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
