YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: mboa-7
Organism: Caenorhabditis elegans
Length: 453 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mboa-7.

Description E-value Query
Range
Subject
Range
gi|113413682 - gi|113413682|ref|XP_001129292.1| PREDICTED: similar to O-acyltransferase (membrane bound) domain con...
326.0 [0..4] [453..307]

Back

Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENILGLMSK DDWIYTGLLL FSFGASCYVR KIGNNILASG ALGFAMSLFI IGPKIVYSLG  60
   61 ICSIAISIQL LANKKSTPLY VFLTTFTYLM FVRFAHYILP VNEVASHTNV IQLIITLRII 120
  121 GITFEENDAW VHKSDENPTK RYLTELPTIL EKFAYFYHFC GLFTGPYYTY QMLIDSQNPI 180
  181 LKSWDPTLEV KSRFVRLLWS VPVFVITNHY FPLDILRSDA IWE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSFFTRLVYA ALIFVVFKTR VYSAWAIAES ICVILGIGIY PAASNPKIIM GPTDLNAFDK  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [284-453]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKTRENIEMS SDAIVNLDIP KVEFSDGFRD GMKAWNRSVQ TWLALYVHSR VKVMRVETTM  60
   61 LVSAVWHGTY AGYFMSFGVV AMCAILEDVI FKLVPVDTET GVRPKWFRIL YTHTIRCRGF 120
  121 EMLATGFLLK NAYDVHHFWS SIYYWLPLLC IPFYIYSAKI SKPKKAQKSE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle