| Protein: | pfn-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 131 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pfn-2.
| Description | E-value | Query Range |
Subject Range |
|
|
192.0 | [0..1] | [130..1] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MSGWDDYIKL LFGKSPAIKR AAIIGSDGSV WARSGDANAF RATEVELKRF AALFNDINSV 60
61 PGTGADLEEI HYIVPRVEEK LIFGKKEQTG FFAAKTNQAI VIAMYEGDNA QSASVRAGVE 120
121 YIAQYLASSG Y
|
| Detection Method: |  |
| Confidence: | 46.0 |
| Match: | 1g5uA |
| Description: | Profilin (actin-binding protein) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.981958446142 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.51470611165788 | bayes_pls_golite062009 |
| actin monomer binding | 3.80837480536839 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 3.24248939295046 | bayes_pls_golite062009 |
| binding | 2.83703195704118 | bayes_pls_golite062009 |
| protein binding | 2.14534188091242 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.31000748285548 | bayes_pls_golite062009 |
| phospholipid binding | 0.97710893946313 | bayes_pls_golite062009 |
| transporter activity | 0.180500198820559 | bayes_pls_golite062009 |
