| Protein: | nas-15 |
| Organism: | Caenorhabditis elegans |
| Length: | 571 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nas-15.
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..1] | [571..1] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MREYVLIFLV APVFAAILGP YDIPPELPPL NDENFFDRSH SEYETVLTPE DFELGTRITA 60
61 AMAHDNGD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [69-229] |
1 11 21 31 41 51
| | | | | |
1 DIWDSDAMYS KDRFEGDIAN DNLNASTAEL FANGGSGKSE DGKWYNAIKN RLQLWPEGRI 60
61 PYTISSQYSS YSRSLIAASM QEYASHTCIR WVPKEAADVN YVHIYPDRGC YSMVGKMGGK 120
121 QSLSLGSGCI QKGIILHELM HAVGFFHEQS RTDRDDHITI M
|
| Detection Method: | |
| Confidence: | 46.69897 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [230-571] |
1 11 21 31 41 51
| | | | | |
1 WNNIQAGMQG QFEKYGHGTI QSLGTGYDYG SIMHYGTKAF SRNGQPTMIP KKNGATIGQR 60
61 NGFSKVDKFK INTLYGCPVE GEKPTTSAPT SGPIVITVKP VVITTGKPPV IQTVSPAVPL 120
121 KPSECRNLRG DCDDLAKQGW CIRNPGWMRA NCPISCGMCI PTKETQKPYV QTTTQAATTT 180
181 ARPQKPVTQP IQPLPPVPPL PPTTPEDCED LRVDCLVLVS QRYCKISQNF MKSYCAKSCG 240
241 FCFKPPPTEI PDNRPTVVTT RPLVTLPPAV IRSRSPAPPV STTTKAAPTT STTSAAPYSP 300
301 TPLPSECSDR KHFCSHWKSA GFCEGIFMNY MKKNCPASCG LC
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.945822943902565 | bayes_pls_golite062009 |
| protein binding | 0.513051538906644 | bayes_pls_golite062009 |
| catalytic activity | 0.34605294925773 | bayes_pls_golite062009 |
| receptor binding | 0.0218857243240818 | bayes_pls_golite062009 |
