YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE39472
Organism: Caenorhabditis elegans
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39472.

Description E-value Query
Range
Subject
Range
gi|50748728 - gi|50748728|ref|XP_421380.1| PREDICTED: similar to KIAA1124 protein [Gallus gallus]
179.0 [0..4] [315..703]

Back

Predicted Domain #1
Region A:
Residues: [1-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNHFSFLLF LLVIGSAHNK KTQYRTERIN FIYEKALQHV TDRQNLARLE KELSGYDAIY  60
   61 LASKSNRQGT QGTKEIDKID DKLGKILEKY GLEKAVLAFK EKYKHKNLFQ QTDDNEPLPS 120
  121 GKFTDQNLQK LWSQAQNGKF SQKELNALHG ELKEVEQKMR VYEDQLDDFK KVPHENSIQH 180
  181 DIESIGDKTK KLKAANRELN DHLDEVHRKV TSEEFSPFNE PRVKRLWKLA QENEKLTPHE 240
  241 LSVLKDELSH FESQLKKIEF HKEEVSRLQE DAEERGKDKS QVYENLELSI KHEKLNRKAR 300
  301 KLEKYIEEKI IIHREL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.30103
Match: 2p01A
Description: No description for 2p01A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle