| Protein: | CE40187 |
| Organism: | Caenorhabditis elegans |
| Length: | 370 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40187.
| Description | E-value | Query Range |
Subject Range |
|
|
229.0 | [0..3] | [338..328] |
|
Region A: Residues: [1-370] |
1 11 21 31 41 51
| | | | | |
1 MSSAEEEQFL REWAFSSRLL FYSIIAVTSI TLPVLVIIMV LIRPHRNSQY FPYMCGIIAG 60
61 NFVLLSTVFT LVVSENVNFV YSYLPGFMIC KFSAFLVNSA SCFIHWTWVG MYSQRFLHVF 120
121 FPLRSRRRLP RSTWNTLLII LLISCTCQIW APITITELSF SPGNNSQGTY CAEDPYFSSS 180
181 SKIIVLVEST ITFFIPFMLT VLADISVLVS KVPWQTPFKL ISADDLRNNN RSDNMKIVSK 240
241 LNLESAEKRR INAIKRCLIS ATLTLVLNLP NYVLQVVDEF YSLREHGNIS IRRVFLQADA 300
301 AVYILYLLQF PLVPVNMYFL RQNITRSSRK LREKTTLQQE HSKSFQVLEM SNDQSRIPLS 360
361 TTIPSPMSHA
|
| Detection Method: |  |
| Confidence: | 48.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
