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View Structure Prediction Details

Protein: dhs-20
Organism: Caenorhabditis elegans
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dhs-20.

Description E-value Query
Range
Subject
Range
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima GN=fabG PE=3 SV=1
FABG_THEMA - 3-oxoacyl-[acyl-carrier-protein] reductase FabG OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / D...
275.0 [0..37] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVCCLCTLF TWVLYFVAVV VVWNIVRYIL ELIPEGGSLQ DRAILITGCD TGFGRELAKK  60
   61 CAKNGFLVFA GCLTTEAAKT LESESANPRL RTVPLDVSKD ESVEKTVEFV KKSLGNHKLW 120
  121 GVVNNAGIFS CYGPDDWCRM NDYKLALDVN CLGVIRVTQA FKKLVKAAKG RIVTVTSVNG 180
  181 RLSTPAAGPY VVSKFGAAAY MDCIRQELYN FGVKVSILEP GIFRTPLLDE QAMLKRVDHV 240
  241 WTQIDDETRT EYGETFKNYF AKMWNKTYIS MSTTKIHYVV DNYYHALTAK YPRHRYYCGW 300
  301 DAIFVYVPLS LLPTWWADYV IRSLGKQEVV PACLEDSMKK KN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.69897
Match: 2p68A
Description: No description for 2p68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle