| Protein: | srt-52 |
| Organism: | Caenorhabditis elegans |
| Length: | 328 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srt-52.
| Description | E-value | Query Range |
Subject Range |
|
|
224.0 | [0..17] | [307..5] |
|
Region A: Residues: [1-328] |
1 11 21 31 41 51
| | | | | |
1 MNSLLIYGSV QANPLYNCSA KPASQWTDEL GTQRIFLGVI LIIFGIIVEI LYVPCLGAIY 60
61 KKKLLQHSCY KIMFLLGITD MLTTCTATIL SGYLLTVGAV FCTYPELIYV AGCFALGGWV 120
121 SSCAWTLLLV INRISDMIAP RISDFLFSGN RTWIVALIPI PYTLSVMFFT PAIIFNSTVM 180
181 AWIGDPLIYE ERAQDYYNPI QNLNNVVFIS GTIVLYGAYC FFMAKKTMGY KVSAGKNVFI 240
241 QSTLICSINC SSALVYSSMM FHKPNEYIVL FGELAWSFVH GCPAIIYLTM NKTVRQEVLR 300
301 WIRRKNPAVQ DSDKYTANSL EHRSRNTL
|
| Detection Method: |  |
| Confidence: | 48.39794 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
