| Protein: | lrx-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 368 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lrx-1.
| Description | E-value | Query Range |
Subject Range |
|
|
279.0 | [0..17] | [367..2280] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MAWLTSIFFI LLAVQPVLPQ DLYGTATQQQ PYPYVQPSAS SGSGGYVPNP QSSIHTVQQP 60
61 YPNIDVVEPD VDSVDIYETE EPQFKVVNPV FPLGGSGIVE PGTIP
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1ijqA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [106-368] |
1 11 21 31 41 51
| | | | | |
1 PPMPQTQAPE KPDNSYAINY CDKREFPDDV LAQYGLERID YFVYNTSCSH VFFQCSIGQT 60
61 FPLACMSEDQ AFDKSTENCN HKNAIKFCPE YDHVMHCTIK DTCTENEFAC CAMPQSCIHV 120
121 SKRCDGHPDC ADGEDENNCP SCARDEFACV KSEHCIPANK RCDGVADDCE DGSNLDEIGC 180
181 SKNTTCIGKF VCGTSRGGVS CVDLDMHCDG KKDCLNGEDE MNCKQEGRQK YLLCENQKQS 240
241 VTRLQWCNGE TDCADGSDEK YCY
|
| Detection Method: | |
| Confidence: | 30.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
