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View Structure Prediction Details

Protein: CE38669
Organism: Caenorhabditis elegans
Length: 554 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38669.

Description E-value Query
Range
Subject
Range
CE17245 - status:Predicted UniProt:Q9GZH0 protein_id:AAF98634.1
519.0 [0..53] [554..12]

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Predicted Domain #1
Region A:
Residues: [1-205]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHFVSEQKL ETIVEESQIL FVSTERHIRI MRRTKLLVIF LTLLIVVLFY YSFQELKKTI  60
   61 ETDISNFESS SQYSTESESE PEPPLKPGLL IDPTRRLTRK LPVSHVFITS AYYYPTSKSL 120
  121 GSNAVAFTMV VDSINFNVEN ATYNVVGSNG THTELTVATS QVEGVPTCRY TPVMARTNSV 180
  181 ANMTKLKMES NGVIVEIPFK MARYT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [206-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APKPVIICIS PQFVAEQWQI FMMHIHVANR FGGHLHIYLT SIIDSFFNLM KEYERQGYIT  60
   61 LDYWLRMKFS NTKTPYFEPN ENIEWRNQAG AQTDCLLQYK EAVEYIAFFD MDDILFPKNY 120
  121 PTYLEEFSAE WALQPDATSV FYGRREHEFL KAESLSEFSF RDLVSSLRSS PTVKRGKVVV 180
  181 KPDRYNSTWI HFSYNEDQGT RRSIDNPTLI HVQRPLQKNG NNNITKVWKM NFGPLNETIR 240
  241 TQDINAIEED IERIRRIPAV LSIASKL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 1h7lA
Description: Spore coat polysaccharide biosynthesis protein SpsA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity 0.117862115002202 bayes_pls_golite062009
catalytic activity 0.075405962065044 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.00643109218840909 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [473-554]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSADFYLPIV FKCYYDAFYD NAFDHRKAQH GCPNADTCEL PQRKEFKCVH SHAKYFSGPH  60
   61 MQPFTYHFAN NSFWSWNIGC YQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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