Protein: | CE39600 |
Organism: | Caenorhabditis elegans |
Length: | 439 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39600.
Description | E-value | Query Range |
Subject Range |
|
469.0 | [0..4] | [439..10] |
Region A: Residues: [1-180] |
1 11 21 31 41 51 | | | | | | 1 MLQLLLFLIF CSFTNASSCQ DKSPYCNPND CEVRPGYAMV YCRKTCGNCA DFCEDSKFIT 60 61 CSAERKKDCD DMLSDYCPRL CGKCYAKLKP DSKRTKTIPV TQFKRNPAAT STTTTTTRSP 120 121 SIRMKQPRML PNGTFINPPL PKYEKLDDTT YTIPEHPTVI DYPIAHMEEL MIPEPQRIWP 180 181 |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [181-283] |
1 11 21 31 41 51 | | | | | | 1 EPEPMRIEPI SVYSPYSFVP VQPQVSQPYS PWSPTLGLSS SLDSSRRAPQ NYFSSYSQYP 60 61 QYPDEKLNTI APNPMQLVEP FLTPGQNDLN PKSMSSLINL LGC |
Detection Method: | ![]() |
Confidence: | 10.09691 |
Match: | 1astA |
Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [284-439] |
1 11 21 31 41 51 | | | | | | 1 KDKDEVICKH VTADTCLSRP GYYLKLCPVT CKNCSGYQCI DSIKIDCAEV KAQGACKLSV 60 61 ASEYCPRTCE YCNPPSDMAK TMSDCKDELE TCEQLAESGA CQHDFSKSAL RLYCAKSCGF 120 121 CKIPQFYFSD SPLMASVVST RKLMKSSLNR RDRFLG |
Detection Method: | ![]() |
Confidence: | 1.22 |
Match: | 1zlgA |
Description: | No description for 1zlgA was found. |