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View Structure Prediction Details

Protein: CE40417
Organism: Caenorhabditis elegans
Length: 472 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40417.

Description E-value Query
Range
Subject
Range
CE16202 - WBGene00010483 status:Predicted TR:O45633 protein_id:CAB05237.1
586.0 [0..14] [472..21]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRTNWLDSS NNSPDNADNE DENVTDVVQN AGQAEANDWN EPEDYDEDSE DEEEDYEEGL  60
   61 DESLDTDSDE GVAYHNGELE QIEVPLLQEI NIQESFNKFL EESIALHRAR IGIIELIRTI 120
  121 RDGVLRIIPE ENLELLRQED GQESAVLSHL QLRDELDKRN FFVEYAMALQ DG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-472]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVDVSRALTK LRNDQGEINE ILADRAVEIK SEEERRKKLH RVGNFIYNQF HRRQQAERNN  60
   61 ANRPVEDRLE EGERPNHDEA EFEFWLDLMI AQHIVLLSRT EEYEATPDMN HHRIMQSRVD 120
  121 QNFQRILAPE NDSWSRDKLQ IFRLLLTEEQ NTIESRRFLY NSILKQNHQD DAVLFQVITT 180
  181 LLDQVIRQNY YLNLNIPADN LPLRNPQESD RNNVNGNADG GKNEKHGAED SSKKDEQRDE 240
  241 ARDKDPQDSR EDVENELSCS NSASNIGNQD REDSQDPPQR SRKRGNQSEL PVSKRAREQE 300
  301 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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