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View Structure Prediction Details

Protein: CE40463
Organism: Caenorhabditis elegans
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40463.

Description E-value Query
Range
Subject
Range
gi|91077018 - gi|91077018|ref|XP_966622.1| PREDICTED: similar to CG9924-PC, isoform C [Tribolium castaneum]
216.0 [0..9] [322..106]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAENKSNTD NNYGEIQLVF KLVDKKYFFN PLFHRSEHSI AKIRNLPWTL SLVKKDQIKV  60
   61 TISCNEDSSS NVWKCEADIA LEINYHDVRS DTPTKMETIF EGRKFDFNKR IMEETVEQWI 120
  121 DVFNGKIELK GAITVTAKVK VTKLYGYRKR KMLDFSTNHP DYFDGVLLVE NKKIYVQKRY 180
  181 LATKSTYFWN IFFGDFKEKE QEAVEIPGVK YDDVIQFLNF IHHTDSQINI ETIENMMVLA 240
  241 DLFLIDCLMC CCEKILIKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.045757
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [260-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSVNLAKKLI WAERFALNEL MDHCLDGFKK MQDFVEFRKN EFYAGVSDDI KSTLLDRVMK  60
   61 IKGYRYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.045757
Match: 2eqxA
Description: No description for 2eqxA was found.

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