| Protein: | CE39252 |
| Organism: | Caenorhabditis elegans |
| Length: | 449 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39252.
| Description | E-value | Query Range |
Subject Range |
|
|
241.0 | [0..1] | [446..49] |
|
Region A: Residues: [1-449] |
1 11 21 31 41 51
| | | | | |
1 MNEELAENSS VTGNSQIGLV TPRDTWGRKE SSPTDRWYLV YIIFTMHGMG MLMSWNMFIT 60
61 IAPQYYHDYW FNNTNYQDSF MSIIGVTSQI PNVGIMILNT IVVMVGFMML RVVVPLIVNC 120
121 ILIGVIVILA IFVTPSPDSV TWFYIVTLII IMAMNLANGI YQNSVYGIVA DFPDNYINSL 180
181 VIGNNLCGVF TSVLSILTIL ISPNDIELNA LLYFSISLAF MIVCLFSLYF LVRLPFYQYY 240
241 MAKGVEARAE EKVDNPSIRQ YWECFRMCWV QLFNNFYVYF VSLLIFPAMM TDSVYSDPTN 300
301 GITSVFGDSL FFPITTFLNF NLFAWIGSSL ANYVQFPSEK YLWIGVALRT VFIPFYLFCN 360
361 YRPDTRRWPV WFKNEWWFTI GCTIMAFTCG YMSSLALIYT PSKVPARYQK LSGMLASIFL 420
421 MLGILIGVAS TPIAAWAVDS IGSRKNMTV
|
| Detection Method: |  |
| Confidence: | 36.221849 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| binding | 1.45862166005114 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
