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View Structure Prediction Details

Protein: CE38080
Organism: Caenorhabditis elegans
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38080.

Description E-value Query
Range
Subject
Range
gi|45387849, gi|... - gi|45501115|gb|AAH67161.1| Solute carrier family 31 (copper transporters), member 1 [Danio rerio], g...
159.0 [0..2] [156..22]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMMNMSMTT MSGPVAKRHR MWMWYHVDVE DTVLFKSWTV FDAGTMVWTC FVVAAAGILL  60
   61 EALKYARWAT EERMKIDQEN VDSKTKYGGI KIPGKSEKYN FWKRHIIDSL YHFWQLLLAY 120
  121 ILMNVYMVFS VYICLSLCFG LAIGHFVFAS RTGSSL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.769551
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle