YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE41399
Organism: Caenorhabditis elegans
Length: 574 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE41399.

Description E-value Query
Range
Subject
Range
gi|4185283, gi|6... - gi|6753366|ref|NP_033992.1| cell division cycle 45 homolog (S. cerevisiae)-like [Mus musculus], gi|4...
751.0 [0..1] [569..1]

Back

Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIEDNFRQE FYNKIKKGDK SVVLIVSVDT DALCTTMILT HLLRCDDIPF SILAVEGWSS  60
   61 VEKIFADSQE QKCHYILINC GATRSLTRLQ IPPASIAFVI DSHRPFHIEN VYENGQIHLL 120
  121 ANPSEMSELQ IPDLESVIRE DSDDEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSDEDEDQEY ISYEQRMEKI RRKAIKREEM QIWERQRRTI LWRYYESTWF SSPSCVTLLE  60
   61 MAAEMNRVSA ETMWFTAVGL NSAMADKLIS IEMYTQICVD RMRPFVHRFM PKNIVNQGKV 120
  121 DD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [269-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLHITFGREL PLALYSHWDL FSAMMVSEYF SIKTKNWTQK GDVNIRHLLA QLGITLHETK  60
   61 QKFEALPTEQ RNLVVDVLEK EMDSSFATFF GTLGYCGKLS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [369-574]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ACDVARAVTL RLEMPKSETI MNRFRSGQSI LRSSITGERQ DRLNLNNTFT SICQRTLQVS  60
   61 WKTVAAAINQ SEIIPNGPYY LFSCSRSIDE DMVDSRHFLY NTAGFMIRAF ASMKKGRTTK 120
  121 PLIAMFPLTG ESAGWLVVTG VMPIATIYED SLLKTCIGRA FERVKKMTPP LRIVDDYFNS 180
  181 DIIRLKSEDR TRFIDFLQTV FEGTSN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle