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View Structure Prediction Details

Protein: set-27
Organism: Caenorhabditis elegans
Length: 502 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for set-27.

Description E-value Query
Range
Subject
Range
gi|73964462 - gi|73964462|ref|XP_547974.2| PREDICTED: similar to CG32732-PA [Canis familiaris]
344.0 [0..1] [502..20]

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Predicted Domain #1
Region A:
Residues: [1-502]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPSPTAELE DQILGKIATL FEETLSKQPP SNIVELWKEH VEIRRILNDV ISIQAKLGDT  60
   61 DERLANSKRD ADSIKTFLAW ADGVGIARNN VTIGSTKTAG LSLQATGPIP KSHIVARVPR 120
  121 HAMITLDLAK KSSLLKKAFE KDPIVGGMDN VGLALFLACQ WIQNEKSKWK SYISILPTTF 180
  181 PTPLFYSEEQ LLQLKPSPIF EEAILFYRTI SRQFCYFLLA IAKNKIYEAA QRRKDARNAM 240
  241 ETPIFYNVPF NVANFTPKLY FWAVGVVTTR VNMVPSENQV GEDGNPVIIP ALIPVLDMAN 300
  301 HENVLTDVLT EPIEDLVCYS PEEECAVITS HCDVKAGNEV TIFYGCRSKG EHLLHNGFVP 360
  361 IYHGKFDVLK LKIGIPKTDK TLDAKKKLIQ KFVKKVYCAG NIFHVDLYNY HEQPFPLDLL 420
  421 MFAAIFVSTT PTEEAVSAPE NRKKGLEFLK TRFSLLKRSY ESSFDASKLK EIGIDGDSAR 480
  481 LKSAELDILQ LALNYCETLE KQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.30103
Match: 1mlvA
Description: RuBisCo LSMT C-terminal, substrate-binding domain; RuBisCo LSMT catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.889033558941342 bayes_pls_golite062009
histone methyltransferase activity 0.0999874745094336 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle