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View Structure Prediction Details

Protein: CE40296
Organism: Caenorhabditis elegans
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40296.

Description E-value Query
Range
Subject
Range
CE02995 - chitinase status:Partially_confirmed UniProt:Q17834 protein_id:CAA91147.1
374.0 [0..1] [460..1]

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Predicted Domain #1
Region A:
Residues: [1-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPADSNSTS VPLLRNQNLI PNRRQPTQWK HLAKPCLILI AILVLSAPVA YSLSELIMVA  60
   61 RHKSPAVSNL IELLIPSSKT SRTTTKTNDS TMTKLVQKSD ENFSPPAAFC GKRIVGYFAE 120
  121 FENTALTRKQ LRMLTHIVFL FAFPKNGTIT FGGESSSQKF EEMRRNVRKA SSTLKVMISI 180
  181 GGQYNSGEFS GLVSNETSRN LFVNSIATFV RDYDIDGVDI FWTWPKHSDE NNYLMFIREL 240
  241 RYAFTELQKK LNRKETFVIS LVISRNVNHL SKLVEFSNFV DFINIYSFNS YLYQVGPDSP 300
  301 LYGGGSRNVD EIMKYYICKT GQPSKFNIIV SFHATYWEGA ELPLRDDSDD IFKDQNSAKG 360
  361 GFAVRWRELL QQKWDMSNIK FHNLTKTSYM WIPGPPTRFM TLEDEKSLRE KNRYVADHNI 420
  421 GGITMWTIDQ DDGDHTLLKV VSSAELCTGD RRNEIKYKCD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.0
Match: 1rd6A
Description: Crystal Structure of S. Marcescens Chitinase A Mutant W167A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.00445818053203 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle