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View Structure Prediction Details

Protein: CE38979
Organism: Caenorhabditis elegans
Length: 454 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38979.

Description E-value Query
Range
Subject
Range
gi|157750450 - gi|157750450|ref|XP_001678938.1| Hypothetical protein CBG11221 [Caenorhabditis briggsae AF16]
gi|39590289, gi|... - gi|39590289|emb|CAE66027.1| Hypothetical protein CBG11221 [Caenorhabditis briggsae], gi|187030549|em...
432.0 [0..1] [454..1]

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Predicted Domain #1
Region A:
Residues: [1-454]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSKYSRTFF FLLLTMLVCT IVIFSMAPRI TMSFWTSKET NILWRRKETA HLDCGRILAN  60
   61 DRSYIEKFIG EHRIPLSSNL ESLDMSCYSI QNRIIPFNFH LRPLKIGVVF ARVVYKDYEF 120
  121 LEKQVQMSYH PQNIFCFFID SKSKDDFKWR IRRLGRCLPN VFVIDEELRI DSAGHNMNLA 180
  181 HYKCMEKMVK LPDWDYFILM QNHDVVGKSV YEISRIFEIL DGANDIDIDK EFGRIDESLK 240
  241 WDLKTLRLFR DESALNSTYL NSTLRVSKGS VQGSLSRAAV EWMVKTVNPR VYLDQWNEGA 300
  301 YGVDEQWIST FQANDFLGMP GHFSDICLNE TGNKTDFITR WSKWSWSDEI ARKCGSKFVR 360
  361 HGVCIMGIEE LPVIAQMPNI MFNKMLPSFD YAIIDCTAEL IYNRTFLGQE DHPLEEEYYA 420
  421 NMVNVIYHKH HLEPNYELNC TPGYELWRNR KYPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 2gakA
Description: No description for 2gakA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle