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View Structure Prediction Details

Protein: CE39201
Organism: Caenorhabditis elegans
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39201.

Description E-value Query
Range
Subject
Range
gi|114051111, gi... - gi|6491906|gb|AAF14069.1|AF080607_1 alpha (1,2) fucosyl transferase [Macaca mulatta], gi|114051111|r...
365.0 [0..4] [398..2]

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Predicted Domain #1
Region A:
Residues: [1-79]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRFSVTRSL YHSIFIGLCV YILFLFNLSK TRLTPEERPA TYMKKNVFYQ SGNEATLDNC  60
   61 PWPISNVENV INRVSVLEN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [80-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGKRYIFSDF GYSQGIGNLM FQVAGLLSIA RETGSILLIP STTTLRRAFD FETTFNDSIQ  60
   61 FVGEDLSRQL AEDLNASKIT LTSCCAYRNL STILFNDSRI IERIDGYFQN FRYFHPDSQK 120
  121 IVKKLFTFMD PVRKRVDEFL ENVGISLTVR NARVIETNVA NDDQALELPE EDAFAKTMMV 180
  181 GVHIRHGMDI SMNSRNRIHG HVDTPIEYYK RAIQQISKIY ENVAFIICSD NVAWARRNLK 240
  241 LGKETLHFFC PGPREVDMAI LKSCDSVIIS TGTFGWWSAY LNVNASPDVY YYKHWPAPGS 300
  301 VMEKMTNKTE YFLKSWTALE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.69897
Match: 2hhcA
Description: No description for 2hhcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle