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View Structure Prediction Details

Protein: CE40579
Organism: Caenorhabditis elegans
Length: 325 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40579.

Description E-value Query
Range
Subject
Range
CE34395 - WBGene00022466 status:Partially_confirmed TR:Q9N582 protein_id:AAF60432.2
481.0 [0..70] [325..1]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATQKKSSLS SCRGKDLSKM TDLSKLYKKV ERISKRIFHS EKPQSTFVPS AQQTNSAQST  60
   61 SSSSTTDPQM PHQPVLLNPP YPPVHPGFGT GFPQFSYPQH QQQIPNPPYG WALNAAALPP 120
  121 YPSSTASSSS ASQTPSFAPL SLDTGSGNET AGSGFDHLAV HHDDNHDERD YLIPDQHEII 180
  181 ELRKAQSAKL EQGKQRVINE VTSLNLITND VTELKKWFDA KYPHTLVNDA ATNEEELERT 240
  241 VRKLEEKLKR LRAKSAKGVP PPRPPPPRSI SQENSTGPWI CDRCSRENNS NSYRCHHCQL 300
  301 PSRRFDPSEI DFCGCEYCST ANSTA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle