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View Structure Prediction Details

Protein: atg-5
Organism: Caenorhabditis elegans
Length: 273 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atg-5.

Description E-value Query
Range
Subject
Range
ATG5_MOUSE - Autophagy protein 5 OS=Mus musculus GN=Atg5 PE=1 SV=1
380.0 [0..2] [273..4]

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Predicted Domain #1
Region A:
Residues: [1-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYEVCRKVW ESHVPCQFTL QSSGGTHGEP LPFYTMLPRF SYLALAIQKV LSSFNRRDDG  60
   61 EKVHSDKMWL EHNGIPLKMY IPIGVIYDQA NLSENDSILE IIVRTSQPPP QFQMVDRDMM 120
  121 EAMFMQNIKE ADYLKTKAEI TKNMMKDESA QLWRSVCNNN FDEFWTIVQK LMETSEGNEF 180
  181 AHIPLRVYVK NQAFKQALIT AKHPDGSLRT IGEAVSDVLS SSSSSSTDSQ SEHPPRLISH 240
  241 GIDIPHHTPL IFAAKNLSYP DNFIHVVLLL VVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.154902
Match: 2dymA
Description: No description for 2dymA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle