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View Structure Prediction Details

Protein: sesn-1
Organism: Caenorhabditis elegans
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sesn-1.

Description E-value Query
Range
Subject
Range
gi|109073095 - gi|109073095|ref|XP_001092695.1| PREDICTED: sestrin 1 isoform 3 [Macaca mulatta]
641.0 [0..16] [459..75]

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Predicted Domain #1
Region A:
Residues: [1-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTTTKRRKA MDWLNFDPIP EVDRLFRFTC KHPTLHVHMT GSYGHMFVDI SDLPASARHY  60
   61 LALMAASRHR CLSLMDHHRR KFLEKGGQQM WLLGIDWSYM KFRKLDYLNR MLCHRPWMIH 120
  121 WKNLAVLFAR RTPDGGPAFF SVCSLHHAVG IMSMTHAMCT VICCIGLERR VDLTQDEIDF 180
  181 LNIDDLDYWE ARMSAYFRKV PDRRPTEVEY LISELKKTEK GQTRPPAKMC AMTTETIESL 240
  241 ISAPAATYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2oyoA
Description: No description for 2oyoA was found.

Predicted Domain #2
Region A:
Residues: [250-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNRKNYSPVL LLANIDENGE DIMEKEPPCN YPIYSHHRTF GYIDFRKRPE KDIPPFRVEE  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGWDHVYNTM NEYTDTLTSR LDRMFDHIRT LTGNMPSGSS HASGDGEPPA AVNQNEIDTA  60
   61 AFREAIWNYT QGLYGVRVDD YDYSKINRVL DKGTKTFIKL AACYPHKLTT EFTRALP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [427-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFKDSEKIHV VMMVAMARFQ ASMFHYTRAV CNYNAMCLSK KGWRKPLD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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