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View Structure Prediction Details

Protein: CE41279
Organism: Caenorhabditis elegans
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE41279.

Description E-value Query
Range
Subject
Range
gi|187037605, gi... - gi|39580776|emb|CAE58945.1| Hypothetical protein CBG02213 [Caenorhabditis briggsae], gi|187037605|em...
gi|157746839 - gi|157746839|ref|XP_001668515.1| Hypothetical protein CBG02213 [Caenorhabditis briggsae AF16]
172.0 [0..1] [156..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHIISDVVN TVSDFFPVKR FAALFPAVAT SPTIESVISP PSVDMSPIIR LAGLSGAVAI  60
   61 SLGAYGSHVL RDNPSIDERR RTAFDTASRY HLIHSLALLA SPAARFPLVT AGLFTAGITL 120
  121 FCGPCYHYSI SGVETTRKYT PIGGVTLIIA WLSFIL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 55.522879
Match: PF04241.6
Description: No description for PF04241.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle