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View Structure Prediction Details

Protein: RPA1610
Organism: Rhodopseudomonas palustris CGA009
Length: 285 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPA1610.

Description E-value Query
Range
Subject
Range
gi|134137228, gi... - gi|67545946|ref|ZP_00423864.1| conserved hypothetical protein [Burkholderia vietnamiensis G4], gi|67...
250.0 [0..5] [285..4]

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Predicted Domain #1
Region A:
Residues: [1-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDALDIDHL RQWIGRSEQA TDFVTPQLVK GLRATLFLDI GKPQTGDAAP FTVHWCLGQP  60
   61 VYPMDQLGPD GHPTRGGFLP PVPLPRRMWA GGELQFVDAL KVGDEVTRTS TIGDVTIKQG 120
  121 STGTLCFVTV NHEITTPRGV AIRDRQDIVY RDVPPPSSAP AAPAKPAAAP PAAKHRESHL 180
  181 ADPVLLFRYS ALTFNGHRIH YDRDYVTKVE GYPGLIVHGP MQAALLVEFA AKLKGSVPKT 240
  241 FSYRGVQPLF DGADFSVNAN ETAAGLDLWT ANADGVPTMK ATASW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.0
Match: 1s9cA
Description: Crystal structure analysis of the 2-enoyl-CoA hydratase 2 domain of human peroxisomal multifunctional enzyme type 2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle