YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RPA0841
Organism: Rhodopseudomonas palustris CGA009
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPA0841.

Description E-value Query
Range
Subject
Range
gi|90426268, gi|... - gi|90426268|ref|YP_534638.1| GCN5-related N-acetyltransferase [Rhodopseudomonas palustris BisB18], g...
153.0 [0..4] [198..1]

Back

Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSMALFRMP SVGPAALAPR GNGLLLRAPQ MADFPQWAEL REYSRAYLTP WEPIWPSDDL  60
   61 TRSGFRRRLR RYSEDVASDR SYPFLVFREH DNQLVGGVTL ANVRRGIVQA GTIGYWIGQP 120
  121 FAHQGYMTAA LRVLLPTLFG ELNLHRVEAA CIPTNAPSIR VLEKCGFTRE GLARRYLCIN 180
  181 GVWQDHLLFG LLHDDFRG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.221849
Match: 1nslA
Description: Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.34977492703662 bayes_pls_golite062009
transferase activity 1.85190002724385 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.75772333794819 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.63399963366073 bayes_pls_golite062009
acyltransferase activity 1.60091210227059 bayes_pls_golite062009
N-acetyltransferase activity 1.18612587745848 bayes_pls_golite062009
N-acyltransferase activity 1.18143103040425 bayes_pls_golite062009
acetyltransferase activity 1.12147423121182 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle