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View Structure Prediction Details

Protein: gi|55664300, gi|...
Organism: Homo sapiens
Length: 654 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55664300, gi|....

Description E-value Query
Range
Subject
Range
gi|16549712, gi|... - gi|22749433|ref|NP_689938.1| solute carrier family 39 (zinc transporter), member 12 [Homo sapiens], ...
0.0 [1..654] [1..654]
gi|114629644 - gi|114629644|ref|XP_001153510.1| PREDICTED: solute carrier family 39 (zinc transporter), member 12 i...
0.0 [1..654] [1..654]
gi|109088324 - gi|109088324|ref|XP_001092018.1| PREDICTED: similar to solute carrier family 39 (zinc transporter), ...
0.0 [1..654] [1..654]
S39AC_MACFA - Zinc transporter ZIP12 OS=Macaca fascicularis GN=SLC39A12 PE=2 SV=1
0.0 [1..653] [1..653]
S39AC_BOVIN - Zinc transporter ZIP12 OS=Bos taurus GN=SLC39A12 PE=2 SV=1
0.0 [1..654] [1..654]
S39AC_MOUSE - Zinc transporter ZIP12 OS=Mus musculus GN=Slc39a12 PE=1 SV=1
0.0 [1..654] [1..689]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFRTKLSVS WVPLFLLLSR VFSTETDKPS AQDSRSRGSS GQPADLLQVL SAGDHPPHNH  60
   61 SRSLIKTLLE KTGCPRRRNG MQGDCNLCFE PDALLLIAGG NFEDQLREEV VQRVSLLLLY 120
  121 YIIHQEEICS SKLNMSNKEY KFYLHSLLSL RQDEDSSFLS QNETEDILAF TRQYFDTSQS 180
  181 QCMETKTLQK KSGIVSSEGA NESTLPQLAA MIITLSLQGV CLG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [224-359]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QGNLPSPDYF TEYIFSSLNR TNTLRLSELD QLLNTLWTRS TCIKNEKIHQ FQRKQNNIIT  60
   61 HDQDYSNFSS SMEKESEDGP VSWDQTCFSA RQLVEIFLQK GLSLISKEDF KQMSPGIIQQ 120
  121 LLSCSCHLPK DQQAKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [360-473]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPTTLEKYGY STVAVTLLTL GSMLGTALVL FHSCEENYRL ILQLFVGLAV GTLSGDALLH  60
   61 LIPQVLGLHK QEAPEFGHFH ESKGHIWKLM GLIGGIHGFF LIEKCFILLV SPND

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [474-654]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKSPEDSQAA EMPIGSMTAS NRKCKAISLL AIMILVGDSL HNFADGLAIG AAFSSSSESG  60
   61 VTTTIAILCH EIPHEMGDFA VLLSSGLSMK TAILMNFISS LTAFMGLYIG LSVSADPCVQ 120
  121 DWIFTVTAGM FLYLSLVEML PEMTHVQTQR PWMMFLLQNF GLILGWLSLL LLAIYEQNIK 180
  181 I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle