| Protein: | TAF4 |
| Organism: | Homo sapiens |
| Length: | 1085 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [590..1085] | [1..496] |
|
|
0.0 | [483..1085] | [194..795] |
|
|
0.0 | [1..1085] | [1..1083] |
|
|
0.0 | [448..1085] | [13..650] |
|
|
0.0 | [455..1085] | [1..630] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MAAGSDLLDE VFFNSEVDEK VVSDLVGSLE SQLAASAAHH HHLAPRTPEV RAAAAGALGN 60
61 HVVSGSPAGA AGAGPAAPAE GAPGAAPEPP PAGRARPGGG GPQRPGPP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-334] |
1 11 21 31 41 51
| | | | | |
1 SPRRPLVPAG PAPPAAKLRP PPEGSAGSCA PVPAAAAVAA GPEPAPAGPA KPAGPAALAA 60
61 RAGPGPGPGP GPGPGPGPGK PAGPGAAQTL NGSAALLNSH HAAAPAVSLV NNGPAALLPL 120
121 PKPAAPGTVI QTPPFVGAAA PPAPAAPSPP AAPAPAAPAA APPPPPPAPA TLARPPGHPA 180
181 GPPTAAPAVP PPAAAQNGGS AGAAPAPAPA AGGPAGVSGQ PGPGAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [335-402] |
1 11 21 31 41 51
| | | | | |
1 AAAPAPGVKA ESPKRVVQAA PPAAQTLAAS GPASTAASMV IGPTMQGALP SPAAVPPPAP 60
61 GTPTGLPK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-574] |
1 11 21 31 41 51
| | | | | |
1 GAAGAVTQSL SRTPTATTSG IRATLTPTVL APRLPQPPQN PTNIQNFQLP PGMVLVRSEN 60
61 GQLLMIPQQA LAQMQAQAHA QPQTTMAPRP ATPTSAPPVQ ISTVQAPGTP IIARQVTPTT 120
121 IIKQVSQAQT TVQPSATLQR SPGVQPQLVL GGAAQTASLG TATAVQTGTP QR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [575-743] |
1 11 21 31 41 51
| | | | | |
1 TVPGATTTSS AATETMENVK KCKNFLSTLI KLASSGKQST ETAANVKELV QNLLDGKIEA 60
61 EDFTSRLYRE LNSSPQPYLV PFLKRSLPAL RQLTPDSAAF IQQSQQQPPP PTSQATTALT 120
121 AVVLSSSVQR TAGKTAATVT SALQPPVLSL TQPTQVGVGK QGQPTPLVI
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 2p6vA |
| Description: | No description for 2p6vA was found. |
|
Region A: Residues: [744-818] |
1 11 21 31 41 51
| | | | | |
1 QQPPKPGALI RPPQVTLTQT PMVALRQPHN RIMLTTPQQI QLNPLQPVPV VKPAVLPGTK 60
61 ALSAVSAQAA AAQKN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [819-975] |
1 11 21 31 41 51
| | | | | |
1 KLKEPGGGSF RDDDDINDVA SMAGVNLSEE SARILATNSE LVGTLTRSCK DETFLLQAPL 60
61 QRRILEIGKK HGITELHPDV VSYVSHATQQ RLQNLVEKIS ETAQQKNFSY KDDDRYEQAS 120
121 DVRAQLKFFE QLDQIEKQRK DEQEREILMR AAKSRSR
|
| Detection Method: | |
| Confidence: | 33.69897 |
| Match: | 1h3oA |
| Description: | TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.581886805340955 | bayes_pls_golite062009 |
|
Region A: Residues: [976-1085] |
1 11 21 31 41 51
| | | | | |
1 QEDPEQLRLK QKAKEMQQQE LAQMRQRDAN LTALAAIGPR KKRKVDCPGP GSGAEGSGPG 60
61 SVVPGSSGVG TPRQFTRQRI TRVNLRDLIF CLENERETSH SLLLYKAFLK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
