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View Structure Prediction Details

Protein: gi|56785229, gi|...
Organism: Oryza sativa Japonica Group
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56785229, gi|....

Description E-value Query
Range
Subject
Range
gi|53982670, gi|... - gi|53982670|gb|AAV25649.1| unknown protein [Oryza sativa Japonica Group], gi|222631631|gb|EEE63763.1...
325.0 [0..1] [352..1]

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Predicted Domain #1
Region A:
Residues: [1-159]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWALTPNSGG SSCLPARRTP PPLAAAGEAG SLAAGPGRWC SWRRRQPAER WPKLAVSASG  60
   61 RKSKGGRDEG GGDEPKKNKA ASSSSSGKGD ASAPSGDVSN NELQSNDTMY VPGNLSYWRD 120
  121 VRASFVVPKV QTVDAHTLPQ AATDAPVHCL PRKWAHSIP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [160-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESGCVLVA AEELDGNGTF ERTVILLLRL GSRDAYDGPF GVILNRPLYT KMKHVNPSFR  60
   61 NQATPFSDCS LFFGGPVDMS IFLMRTTDDR PIKGFEEVSP GVCFGFRTDL EKASALLKSG 120
  121 AVKPEDLNFY VGYSAWDYDQ LLSEIDQGYW HVTSCSSGLI SDSLATDPSC LWTEILKLMG 180
  181 GQYAELSQKP KEDGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.30103
Match: 2hafA
Description: No description for 2hafA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle