YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|2772564, gi\|1...
Organism:	Homo sapiens
Length:	298 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2772564, gi|1....

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	4.0E-85	[1..296]	[173..468]
gi\|194044922 - gi\|194044922\|ref\|XP_001927475.1\| PREDICTED: similar to adenine nucleotide translocator 2 [Sus scrofa... gi\|186886456, gi... - gi\|187936981\|ref\|NP_001120751.1\| solute carrier family 25 (mitochondrial carrier; adenine nucleotide... ADT2_BOVIN - ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3	4.0E-82	[1..298]	[1..298]
gi\|45829841 - gi\|45829841\|gb\|AAH68199.1\| SLC25A5 protein [Homo sapiens]	4.0E-82	[1..298]	[26..323]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	7.0E-82	[1..295]	[15..309]
ADT2_MOUSE - ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3	1.0E-81	[1..298]	[1..298]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	1.0E-81	[9..297]	[211..499]
ADT2_PONAB - ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3 ADT2_PONPY - ADP/ATP translocase 2 - Pongo pygmaeus (Orangutan)	2.0E-81	[1..298]	[1..298]
ADT2_RAT - ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3	2.0E-81	[1..298]	[1..298]

Back

Predicted Domain #1

Region A:
Residues: [1-298]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDAAVSFAK DFLAGGVAAA ISKTAVAPIE RVKLLLQVQH ASKQITADKQ YKGIIDCVVR  60
   61 IPKEQGVLSF WRGNLANVIR YFPTQALNFA FKDKYKQIFL GGVDKRTQFW LYFAGNLASG 120
  121 GAAGATSLCF VYPLDFARTR LAADVGKAGA EREFRGLGDC LVKIYKSDGI KGLYQGFNVS 180
  181 VQGIIIYRAA YFGIYDTAKG MLPDPKNTHI VISWMIAQTV TAVAGLTSYP FDTVRRRMMM 240
  241 QSGRKGTDIM YTGTLDCWRK IARDEGGKAF FKGAWSNVLR GMGGAFVLVL YDEIKKYT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	82.045757
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits