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View Structure Prediction Details

Protein: gi|30248801, gi|...
Organism: Nitrosomonas europaea ATCC 19718
Length: 206 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30248801, gi|....

Description E-value Query
Range
Subject
Range
gi|71550155, gi|... - gi|71550155|ref|ZP_00670297.1| Exopolysaccharide synthesis, ExoD [Nitrosomonas eutropha C71], gi|714...
213.0 [0..1] [206..1]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKEKNTSE LLQLIVVQNT NAVISVDEIK NSLHERGFAV LLAIATLPIC LPVPAPPGYT  60
   61 TVFAIPLFIF SIQMICGMKA PWIPEWLTKK TIKRGTLDKL ITKAAPWLRK IESHMHPRLT 120
  121 YISVHAWERI IGLFSFIFSI SIALPVPLIN FLPGLGILIM SLGLLSKDGL TIIAGMIVGT 180
  181 TGVGIALIVV ALLWMGVPIP FVQSTD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 45.022276
Match: PF06055.3
Description: No description for PF06055.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle