YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|11353842
Organism:	Neisseria meningitidis
Length:	220 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11353842.

Description	E-value	Query Range	Subject Range
gi\|229811380, gi... - gi\|229845694\|ref\|ZP_04465817.1\| phosphoglycolate phosphatase [Haemophilus influenzae 6P18H1], gi\|229... gi\|144985848, gi... - gi\|145633479\|ref\|ZP_01789208.1\| phosphoglycolate phosphatase [Haemophilus influenzae 3655], gi\|14498... GPH_HAEI8 - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain 86-028NP) GN=NTHI0697 PE=3 SV=1	181.0	[0..3]	[215..6]
gi\|145272121, gi... - gi\|145638526\|ref\|ZP_01794135.1\| phosphoglycolate phosphatase [Haemophilus influenzae PittII], gi\|145... gi\|53733330 - gi\|53733330\|ref\|ZP_00156383.2\| COG0546: Predicted phosphatases [Haemophilus influenzae R2866]	180.0	[0..3]	[215..6]
GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) G... GPH_HAEIN - Phosphoglycolate phosphatase OS=Haemophilus influenzae GN=gph PE=3 SV=1	180.0	[0..3]	[215..6]
gi\|55247209, gi\|... - gi\|57965748\|ref\|XP_561314.1\| ENSANGP00000026891 [Anopheles gambiae str. PEST], gi\|55247209\|gb\|EAL423...	179.0	[0..3]	[215..14]
GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida (strain Pm70) GN=gph PE=3 SV=1 GPH_PASMU - Phosphoglycolate phosphatase OS=Pasteurella multocida GN=gph PE=3 SV=1	179.0	[0..3]	[216..5]
gi\|241884351, gi... - gi\|241903285\|ref\|ZP_04788011.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|242258243, gi... - gi\|242258243\|ref\|ZP_04803066.1\| HAD-superfamily hydrolase, subfamily IA, variant 3 [Thermoanaerobact... gi\|166853930, gi... - gi\|167039690\|ref\|YP_001662675.1\| HAD family hydrolase [Thermoanaerobacter sp. X514], gi\|166853930\|gb... gi\|76589066, gi\|... - gi\|76795752\|ref\|ZP_00778124.1\| HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hy...	178.0	[0..1]	[218..1]
gi\|88795676, gi\|... - gi\|88795676\|ref\|ZP_01111369.1\| phosphoglycolate phosphatase [Alteromonas macleodii 'Deep ecotype'], ...	177.0	[0..2]	[214..6]
gi\|240013511 - gi\|240013511\|ref\|ZP_04720424.1\| putative phosphatase [Neisseria gonorrhoeae DGI18] gi\|59717551, gi\|... - gi\|59800656\|ref\|YP_207368.1\| putative phosphatase [Neisseria gonorrhoeae FA 1090], gi\|59717551\|gb\|AA... gi\|240120583 - gi\|240120583\|ref\|ZP_04733545.1\| putative phosphatase [Neisseria gonorrhoeae PID24-1] gi\|240117328 - gi\|240117328\|ref\|ZP_04731390.1\| putative phosphatase [Neisseria gonorrhoeae PID1] gi\|240112300 - gi\|240112300\|ref\|ZP_04726790.1\| putative phosphatase [Neisseria gonorrhoeae MS11] gi\|240080090 - gi\|240080090\|ref\|ZP_04724633.1\| putative phosphatase [Neisseria gonorrhoeae FA19] gi\|240127589 - gi\|240127589\|ref\|ZP_04740250.1\| putative phosphatase [Neisseria gonorrhoeae SK-93-1035] gi\|240122879 - gi\|240122879\|ref\|ZP_04735835.1\| putative phosphatase [Neisseria gonorrhoeae PID332]	177.0	[0..1]	[220..17]
gi\|194547119, gi... - gi\|84319999\|ref\|ZP_00968385.1\| COG0546: Predicted phosphatases [Pseudomonas aeruginosa C3719], gi\|25...	177.0	[0..2]	[217..6]
gi\|42630012 - gi\|42630012\|ref\|ZP_00155557.1\| COG0546: Predicted phosphatases [Haemophilus influenzae R2846]	177.0	[0..3]	[215..6]

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Predicted Domain #1

Region A:
Residues: [1-220]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQAVLFDLD GTLADTALDL GGALNTLLAR HGLPAKSMDE IRTQASHGAA GLIKLGAGIT  60
   61 PDHPDYARWR TEYLDEYDSR YAQDTTLFDG VNELIAELGK RGIKWGIITN KPMRFTDKLV 120
  121 PKLGFIIPPA VVVSGDTCGE PKPSVKPMLY ACGQIHADPQ HTLYVGDAER DIQAGRNAGM 180
  181 TTVLAEWGYI APEDDTGSWQ ADFHIRTPLD LLECLDKIQP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.0
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.92340854382984	bayes_pls_golite062009
hydrolase activity	0.971660704234215	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: