| Protein: | GLYK_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 456 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLYK_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
419.0 | [0..1] | [456..1] |
|
|
202.0 | [0..119] | [454..81] |
|
|
202.0 | [0..59] | [409..318] |
|
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196.0 | [0..59] | [396..243] |
|
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191.0 | [0..60] | [371..326] |
|
|
184.0 | [0..63] | [396..321] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MAVAISGSSL ISSTLQHYNN RIYIRDYPIP CHSSNPICNS FNFKRRSFSP SSPKFNDHVV 60
61 NPSSSYLSSK LSPIRTHSSF AACGCSWIQD N
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.389 | a.59.1 | PAH2 domain |
| View | Download | 0.259 | a.59.1 | PAH2 domain |
| View | Download | 0.246 | a.29.14 | Description not found. |
| View | Download | 0.228 | a.28.1 | ACP-like |
| View | Download | 0.215 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.215 | a.60.5 | Barrier-to-autointegration factor, BAF |
|
Region A: Residues: [92-372] |
1 11 21 31 41 51
| | | | | |
1 SMVHDYATTT NGTSKRCSAL PTTNTVDVSS VSDLFEFICS GPLVNKIGIT PQRVGQSIDK 60
61 WLLYGSQLCR LFQLNELKLT IPQKARLYHY YIPVFIWCED QIALHNSKFK DGDDVPPLVI 120
121 GFSAPQGCGK TTLVFALDYL FKTTKKKSAT ISVDDFYLTA EGQAELRKKN PGNALLEYRG 180
181 NAGSHDLKLS VETLEALSKL TKEGLKMKVP RYNKSAYSGR GDRADSSTWP EVEGPLSVIL 240
241 FEGWMLGFKP LPADVVKAVD PQLEVVNKNL EAYYDAWDKY I
|
| Detection Method: | |
| Confidence: | 22.522879 |
| Match: | 2v3cC |
| Description: | No description for 2v3cC was found. |
|
Region A: Residues: [373-456] |
1 11 21 31 41 51
| | | | | |
1 DAWVVIKIQD PSYVYRWRLQ AEIAMRQDGQ AGMSDEEVND FVSRYLPAYK AYLPTLYAEG 60
61 PSGSDPDRVL AIDIDEERNP ILAN
|
| Detection Method: | |
| Confidence: | 23.69897 |
| Match: | 1odfA |
| Description: | Structure of YGR205w protein. |
Matching Structure (courtesy of the PDB): |
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