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View Structure Prediction Details

Protein: ERF20_ARATH
Organism: Arabidopsis thaliana
Length: 143 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF20_ARATH.

Description E-value Query
Range
Subject
Range
gi|45826360 - gi|45826360|gb|AAS77821.1| CBF2 [Lycopersicon esculentum]
161.0 [0..3] [132..52]

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Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSRDTGETD QSKYKGIRRR KWGKWVSEIR VPGTRQRLWL GSFSTAEGAA VAHDVAFYCL  60
   61 HRPSSLDDES FNFPHLLTTS LASNISPKSI QKAASDAGMA VDAGFHGAVS GSGGCEERSS 120
  121 MANMEEEDKL SISVYDYLED DLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 2gccA
Description: SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.339357445627225 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle