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View Structure Prediction Details

Protein: gi|51971841, gi|...
Organism: Arabidopsis thaliana
Length: 216 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51971841, gi|....

Description E-value Query
Range
Subject
Range
gi|108712240, gi... - gi|50920317|ref|XP_470519.1| hypothetical protein [Oryza sativa (japonica cultivar-group)], gi|31193...
232.0 [0..46] [214..59]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTASLVSY LTSPSLVSLN HLPPSFFLPT KLVKPTSLTH SQPPRLSASY GPAAKAATAN  60
   61 DVVPETAPTS ASEVVSSFYA AVNVHDLSSV TDLIAQDCVY EDLVFSSPFV GRKAILDFFG 120
  121 KFIESTSTDL QFVIDDISTE DSSAVGVSWH LEWKGKNFPF SKGCSFYRLE VIDGKRQIVY 180
  181 GRDCVEPAIK PGETVLAAIK GVTWLLQKFP QLADQF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.1
Match: 1tuhA
Description: Structure of Bal32a from a Soil-Derived Mobile Gene Cassette
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle