| Protein: | gi|15217465, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 784 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217465, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
517.0 | [0..1] | [784..3] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MTRSHCYWFY CIITIYFSFL IHSLASPSLH FCRHDQRDGL LKFRDEFPIF ESKSSPWNKT 60
61 TDCCSWDGVT CDDK
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [75-784] |
1 11 21 31 41 51
| | | | | |
1 SGQVISLDLR STLLNSSLKT NSSLFRLQYL RHLDLSGCNL HGEIPSSLGN LSRLENLELS 60
61 SNRLVGEIPY SIGNLKQLRN LSLGDNDLIG EIPSSLGNLS LLLDLDLWNN SLVGEVPASI 120
121 GNLNELRVMS LDRNSLSGSI PISFTNLTKL SEFRIFFNNF TSLPSDLSGF HNLVTFDISA 180
181 NSFSGHFPKF LFSIPSLAWV SMDRNQFSGP IEFANISSSS KLQNLILTRN KLDGSIPESI 240
241 SKFLNLVLLD VAHNNISGPV PRSMSKLVSL RIFGFSNNKL EGEVPSWLWR LSSTMLSHNS 300
301 FSSFEKIYSK ETMIQVLDLS FNSFRGTFPV WICKLKGLHF LDLSNNLFNG SIPLCLRNFN 360
361 LTGLILGNNK FSGTLPDIFA NNTNLQSLDV SGNQLEGKFP KSLINCKGLH FVNVESNKIK 420
421 DTFPSWLGSL PSLQVLILRS NDFYGPLYHP SMSIGFQGLR IIDISHNGFS GVLPPNFFSS 480
481 WREMITLVHG SYEYIEDIQN YSLIYRSMEM VNKGVEMSFE RIRQDFRAID FSENRIYGEI 540
541 PESIGCLEEL RLLNLSGNAF TSDIPRVWEN LTKLETLDLS RNKLSGQIPQ DLGKLSFLSY 600
601 MNFSHNRLQG PVPRGTQFQR QRCSSFLDNH RLYGLEDICE ETHVPNPTSQ PSEDLLDEEE 660
661 KMFNWVAAAI AYGPGVFCGL VIGYIFTSHH HEWFTEKFGR KKIRVTTSAR
|
| Detection Method: | |
| Confidence: | 62.30103 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
