| Protein: | CAAT2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 635 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
394.0 | [0..3] | [614..939] |
|
Region A: Residues: [1-474] |
1 11 21 31 41 51
| | | | | |
1 MGFLVDTQKE GGGHSWGYVR SLVRRKQVDS ANGQSHGHQL ARALTVPHLV AIGVGATIGA 60
61 GVYILVGTVA REHSGPSLAL SFLIAGIAAG LSAFCYAELS SRCPSAGSAY HYSYICVGEG 120
121 VAWIIGWALI LEYTIGGSAV ARGISPNLAL IFGGEDGLPA ILARHQIPGL DIVVDPCAAI 180
181 LVFVVTGLLC MGIKESTFAQ GIVTAVNVCV LLFVIVAGSY LGFKTGWPGY ELPTGFFPFG 240
241 VDGMFAGSAT VFFAFIGFDS VASTAEEVRN PQRDLPIGIG LALLLCCSLY MMVSIVIVGL 300
301 IPYYAMDPDT PISSAFASHD MQWAVYLITL GAVMALCSAL MGALLPQPRI LMAMARDGLL 360
361 PSIFSDINKR TQVPVKATVA TGLCAATLAF FMDVSQLAGM VSVGTLLAFT MVAISVLILR 420
421 YVPPDEQPLP SSLQERIDSV SFICGETTSS GHVGTSDSSH QPLIVNNDAL VDVP
|
| Detection Method: |  |
| Confidence: | 1.38 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [475-548] |
1 11 21 31 41 51
| | | | | |
1 LIKNQEALGC LVLSEETRRI VAGWSIMFTC VGAFLLSYAA SSLSFPGLIR YPLCGVGGCL 60
61 LLAGLIALSS IDQD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [549-635] |
1 11 21 31 41 51
| | | | | |
1 DARHTFGHSG GYMCPFVPLL PIICILINMY LLVNLGSATW ARVSVWLLIG VIVYVFYGRK 60
61 NSSLANAVYV TTAHAEEIYR EHEGSLA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
