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View Structure Prediction Details

Protein: gi|18405485, gi|...
Organism: Arabidopsis thaliana
Length: 445 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18405485, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
467.0 [0..7] [444..1175]

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Predicted Domain #1
Region A:
Residues: [1-445]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNYQGDDAE YMEDVDDEMD EDDLDEDFRG DDMAASDSDV DEFDYSNNKI ADTSADQARK  60
   61 GKDIQGIPWD RLSITRETYR QTRLEQYKNY ENVPNSGESS GKDCMATQKG ALFYDFWRNT 120
  121 RSIKSSILHF QLRNLVWATS KHDVYLMSQY LVSHYSTLTS GKHDVLNVQG HVSPSEKHPG 180
  181 SLLEGFTKTQ VSTLAVRDKF LVAGGFQGEL ICKHLDRPGV SFCSRTTYDD NAITNAIEIY 240
  241 NKPSGALHFT ASNNDCGVRD FDMERYQLVN QFRFPWPVNH TSLSPDGKLL TIVGDNPESL 300
  301 LVDPNTGKTL ATLSGHLDFS FASAWHPDGF TFSTGNQDKT CRVWDIRNLS KSVAVLRGNL 360
  361 GAIRSIRYTS DGKYMAMAEP ADFVHVYDVS NGYETEQEID FFGEISGISF SPDTEALFIG 420
  421 VWDRTYGSLI EYSRRHNYSY LDSFL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.0
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle