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View Structure Prediction Details

Protein: gi|42561854, gi|...
Organism: Arabidopsis thaliana
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42561854, gi|....

Description E-value Query
Range
Subject
Range
gi|24030215 - gi|24030215|gb|AAN41286.1| unknown protein [Arabidopsis thaliana]
684.0 [0..1] [348..26]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVEEVDDV GRTIEEETVC EKRERGEEAE TLTPWEQHSS IISIPRFDYK APSSLLHHSH  60
   61 SGFLVTCNIK REKSATKEVM SILGKYIGSM HEEKPEVLNS TASKKQKVCA QETEEGGEKT 120
  121 VPLENDALQE TGENPNVEDL KLANEEHNSL MSLVKLTKSG LLLFTFPVEN SPNTTNIVSR 180
  181 VFQSMESGA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [190-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKAPIWCHRI FPVQATCGLT EKELRETVSK LVQRFVNDKD NTLSKPVKFA AGYQRRGAEE  60
   61 TKGKIRKDAS DVLVQCPLLD RIKCFETVAA GVKDIVPDSV VDLKSPELCV LVELLPLSRI 120
  121 SSGSFVAAVS VLPHRLVSTK PKLCIKPLVP ESKHKKGPN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.38
Match: 2dirA
Description: No description for 2dirA was found.

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