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View Structure Prediction Details

Protein: gi|28416853, gi|...
Organism: Arabidopsis thaliana
Length: 114 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28416853, gi|....

Description E-value Query
Range
Subject
Range
gi|92899055 - gi|92899055|gb|ABE94521.1| Heavy metal transport/detoxification protein [Medicago truncatula]
118.0 [0..5] [114..30]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKKIEIKV DIDCEKCKHA IMEAVTELEG VNIVSLDQEK SILTVVGTMD PVCVAEQLKK  60
   61 INKKPVVISV GPPKKPDPKP DPKKDPCFIP YCYYTPRDMV SVNTYESGSG CTIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 1qupA
Description: Copper chaperone for superoxide dismutase, C-terminal domain; Copper chaperone for superoxide dismutase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.246147507070597 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle