| Protein: | gi|42573479, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 422 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|42573479, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
479.0 | [0..1] | [420..1] |
|
|
457.0 | [0..1] | [422..1] |
|
|
442.0 | [0..2] | [405..14] |
|
|
435.0 | [0..5] | [413..17] |
|
|
432.0 | [0..7] | [418..25] |
|
|
416.0 | [0..2] | [414..169] |
|
|
410.0 | [0..5] | [405..16] |
|
|
406.0 | [0..4] | [332..237] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MADLIPFYLN IVAFLCTVGA IALAIFHIYR HLLNYTEPTY QRYIVRIIFM VPVYAFMSFL 60
61 SLVLPKSSIY FDSIRE
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [77-269] |
1 11 21 31 41 51
| | | | | |
1 VYEAWVIYNF LSLCLAWVGG PGSVVLSLSG RSLKPSWSLM TCCFPPLTLD GRFIRRCKQG 60
61 CLQFVILKPI LVAVTLVLYA KGKYKDGNFN PDQAYLYLTI IYTISYTVAL YALVLFYMAC 120
121 RDLLQPFNPV PKFVIIKSVV FLTYWQGVLV FLAAKSGFIK SAEAAAHFQN FIICVEMLIA 180
181 AACHFYAFPY KEY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [270-338] |
1 11 21 31 41 51
| | | | | |
1 AGANVGGSGS FSGSLSHAVK LNDFYHDTVH QFAPTYHDYV LYNHQDGGDE GTKKYRSRTF 60
61 VPTGQEMDA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.590 | N/A | N/A | c.149.1 | Description not found. |
| View | Download | 0.523 | N/A | N/A | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.506 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.455 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.455 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.455 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.400 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.399 | N/A | N/A | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.388 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.356 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.267 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.263 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.208 | N/A | N/A | d.214.1 | Hypothetical protein MTH1880 |
|
Region A: Residues: [339-422] |
1 11 21 31 41 51
| | | | | |
1 MRKNKPVYAN KIDGVSVSSS LSSEASSPKS SSVTSDPARS DAVKSSLLVD ASDSLETMYD 60
61 MSLIDIDLSS FPSNVPSASE SGPR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
