| Protein: | gi|186506900, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 502 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186506900, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
397.0 | [0..1] | [502..1] |
|
Region A: Residues: [1-418] |
1 11 21 31 41 51
| | | | | |
1 MADHKGKVPV SLSASSSSLS LSPKTTPIEA EVWLIAEARA QEILCAIQPN YLAERSRNKI 60
61 ISNLQTLLWE RLGIEVYLFG SMPLKTYLPD GDIDLTVLTH HASEEDCARA VCCVLEAEMG 120
121 NSDLQVTGVQ YVQAKVKVIK CSIRDVAFDI SFNQLAGLGA LCFLEQVDKA FGRDHLFKKS 180
181 IILVKAWCFY ESRILGANSG LISTYALAIL VLNIVNMSYS SLSGPLAVLY KFINYYGSFD 240
241 WKNYCVTVTG PVPISSLPDI TETGNHEVFL DEKFFRECME LYSGETGVVE ASRKYFPVKY 300
301 YNILDPLKHS NNLGRSVTKG NMVRLRNCFM LGVQKLRDVL TLPGENVGWK LEKFFNVSLE 360
361 RNGKGQRQDV EEPVVAFGTG AADYSQLKGD FDRYRNNLIY GKWFHGESLH NWLPPSLD
|
| Detection Method: |  |
| Confidence: | 56.69897 |
| Match: | 1f5aA |
| Description: | Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.222270543382941 | bayes_pls_golite062009 |
| transferase activity | 0.00393984128503999 | bayes_pls_golite062009 |
|
Region A: Residues: [419-502] |
1 11 21 31 41 51
| | | | | |
1 TTSWANISFY MSRVRNGFNG RNQEGPTSMP NIKQSPNNRR SNGTGTYIPG MSKQSNTAGC 60
61 SSSKPSTVKS LPSASETQES KKNP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
