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View Structure Prediction Details

Protein: XG113_ARATH
Organism: Arabidopsis thaliana
Length: 644 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XG113_ARATH.

Description E-value Query
Range
Subject
Range
gi|20197540 - gi|20197540|gb|AAD15452.2| unknown protein [Arabidopsis thaliana]
736.0 [0..112] [644..1]
gi|108709554 - gi|108709554|gb|ABF97349.1| expressed protein [Oryza sativa (japonica cultivar-group)]
704.0 [0..102] [643..75]
gi|116056849 - gi|116056849|emb|CAL53138.1| unnamed protein product [Ostreococcus tauri]
442.0 [0..122] [608..38]

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Predicted Domain #1
Region A:
Residues: [1-106]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEGWRNGFR DATNSKPLFV TIYATVIIGV LVSSFYVFSA IYSPTNGSSS FLSFPPLSTS  60
   61 GRIHSLPQEN ATLELPVAPP PPPQALPPPV LEEAQGNSLG KIWVSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [107-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PRDKKMPPLE TFKLTKELFG ERVKDNVIIV TFGNYAFMDF ILTWVKHLTD LDLSNILVGA  60
   61 MDTKLLEALY WKGVPVFDMG SHMSTVDVGW G

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [198-408]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPTFHKMGRE KVILIDSVLP FGYELLMCDT DMVWLKNPMP YLARFPDADV LTSSDQVVPT  60
   61 VIDDSLDIWQ QVGAAYNIGI FHWRPTESAK KLAKEWKEIL LADDKVWDQN GFNEIVRRQL 120
  121 GPSVEGDSGL FYAYDGNLKV GILPASIFCS GHTYFVQAMY QQLRLEPYAV HTTFQYAGTE 180
  181 GKRHRLREGM VFYDPPEYYD SPGGFIAFKP S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [409-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPKSLLLDGK HTIESHFILV NHQMKQIRSA LAIASLLNRT LVMPPIWCRL DRLWFGHPGT  60
   61 LQGSMTRQPF ICPLDHVFEV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [489-644]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NIMLKELPEE EFGPGIGIRE YSFLDNPLLP KQVKESWLDV QLCQEGKEGC EASNNTSPSR  60
   61 VLKFPKRSNE DTFKAIFSSF DDVKVIKFSS IEDAFIGFSD KEREERFRRR VKRYVGIWCC 120
  121 EENKTPGHIY YDMYWDEKPG WKPVPPQTPE EDHPPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle