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View Structure Prediction Details

Protein: ARAD1_ARATH
Organism: Arabidopsis thaliana
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARAD1_ARATH.

Description E-value Query
Range
Subject
Range
ARAD2_ARATH - Probable arabinosyltransferase ARAD2 OS=Arabidopsis thaliana GN=ARAD2 PE=1 SV=1
385.0 [0..5] [447..10]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKSSLLKR AAIAVVSVIA IYVILNASVS RSLPSSSDLP RQLIREDDDD EGRAPIQPRV  60
   61 RVYMYNLPKR FTYGLIEQHS IARGGIKKPV GDVTTLKYPG HQHMHEWYLF SDLNQPEVDR 120
  121 SGSPIVRVSD PADADLFYVP VFSSLSLIVN AGRPVEAGSG YSDEKMQEGL VEWLEGQEWW 180
  181 RRNAGRDHVI PAGDPNALYR ILDRVKNAVL LVSDFGRLRP DQGSFVKDVV IPYSHRVNLF 240
  241 NGEIGVEDRN TLLFFMGNR

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 13.091515
Match: PF03016.6
Description: No description for PF03016.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRKDGGKVRD LLFQVLEKED DVTIKHGTQS RENRRAATKG MHTSKFCLNP AGDTPSACRL  60
   61 FDSIVSLCVP LIVSDSIELP FEDVIDYRKF SIFVEANAAL QPGFLVQMLR KIKTKKILEY 120
  121 QREMKSVRRY FDYDNPNGAV KEIWRQVSHK LPLIKLMSNR DRRLVLRNLT EPNCSCLCTN 180
  181 QTGLITSI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.09
Match: 2nzwA
Description: No description for 2nzwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle