| Protein: | gi|30685673 |
| Organism: | Arabidopsis thaliana |
| Length: | 365 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30685673.
| Description | E-value | Query Range |
Subject Range |
|
|
445.0 | [0..1] | [301..84] |
|
Region A: Residues: [1-365] |
1 11 21 31 41 51
| | | | | |
1 MAYLERASPT LKETLLKIYR AEKPIEVDQH FHEFGSIEYH IKYSVSDPNI VHVSTSTLLE 60
61 TQGAVTLKEI SSYTYEVIKN IGVGVIDIVD PPRLGFQLTL GLNLDNIPRG KEAIKIITRI 120
121 SELQAIILSS QLKEMLRSLN FQDDSRSINN MPIRIVYHPS EPFYVFKQPE KITAVFPMNF 180
181 KDNSDVVIAT SFFQDMGKAP QCSWSPIPPL QLRGEPVQDL TTNSGFVSFD ITSRHIEGKR 240
241 LDKTVWNLLN FYACAKYHIK CSRGYIQRRM RKRMETLVKL LNNTSLEEEA AQNENGRCKY 300
301 VKEFVKVPKG KLMMKQRCKE MTRRVKISKF RIKINGCARF RFNQRWISLP KFSSKPSDKS 360
361 YTKLD
|
| Detection Method: |  |
| Confidence: | 122.0 |
| Match: | 1k8kD |
| Description: | ARPC2 (34 kDa subunit) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 6.0922573068519 | bayes_pls_golite062009 |
| actin filament binding | 5.01990273175321 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 4.64781612293343 | bayes_pls_golite062009 |
| binding | 2.16088008530271 | bayes_pls_golite062009 |
| protein binding | 1.98253629760139 | bayes_pls_golite062009 |
| structural molecule activity | 1.40122171600941 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 1.37010524302636 | bayes_pls_golite062009 |
