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View Structure Prediction Details

Protein: PARG2_ARATH
Organism: Arabidopsis thaliana
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PARG2_ARATH.

Description E-value Query
Range
Subject
Range
gi|42571009 - gi|42571009|ref|NP_973578.1| poly (ADP-ribose) glycohydrolase (PARG) family protein [Arabidopsis tha...
621.0 [0..1] [522..1]
gi|92877172 - gi|92877172|gb|ABE84358.1| Poly glycohydrolase [Medicago truncatula]
585.0 [0..1] [520..1]
gi|108712051 - gi|108712051|gb|ABF99846.1| glycohydrolase family protein, expressed [Oryza sativa (japonica cultiva...
gi|125546407 - gi|125546407|gb|EAY92546.1| hypothetical protein OsI_14285 [Oryza sativa Indica Group]
558.0 [0..1] [519..1]
gi|50749140 - gi|50749140|ref|XP_421502.1| PREDICTED: similar to PARG protein [Gallus gallus]
517.0 [0..17] [522..608]
PARG_BOVIN - Poly(ADP-ribose) glycohydrolase OS=Bos taurus GN=PARG PE=1 SV=1
516.0 [0..17] [522..512]
gi|73997969 - gi|73997969|ref|XP_534946.2| PREDICTED: similar to Poly(ADP-ribose) glycohydrolase [Canis familiaris...
513.0 [0..17] [522..511]
gi|112005155 - gi|112005155|gb|ABH85399.1| poly (ADP-ribose) glycohydrolase [Homo sapiens]
490.0 [0..17] [522..511]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRADLRSI LQYLPLVAQS SSLVWPPSVE EELQTISRGP SESMVNSGEA LALHITNMRK  60
   61 SLSLNASDLA PYALQGYGLF FDKKISREES ANFFGEVVPA LCRLLLQLPS MLEKHYQKAD 120
  121 HVLDGVKSGL RLLGPQEAGI VLLSQELIAA LLACSFFCLF P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [162-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVDRSLKNLQ GINFSGLFSF PYMRHCTKQE NKIKCLIHYF GRICRWMPTG FVSFERKILP  60
   61 LEYHPHFVSY PKADSWANSV TPLCSIEIHT SGAIEDQPCE ALEVDFADEY FGGLTLSYDT 120
  121 LQEEIRFVIN PELIAGMIFL PRMDANEAIE IV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [314-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVERFSGYTG YGPSFQYAGD YTDNKDLDIF RRRKTRVIAI DAMPDPGMGQ YKLDALIREV  60
   61 NKAFSGYMHQ CKYNIDVKHD PEASSSHVPL TSDSASQVIE SSHRWCIDHE EKKI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [428-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVATGNWGCG VFGGDPELKI MLQWLAISQS GRPFMSYYTF GLQALQNLNQ VIEMVALQEM  60
   61 TVGDLWKKLV EYSSERLSRR TWLGFFSWLM TSLST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.835 N/A N/A d.87.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain


YRC Informatics Platform - Version 3.0
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