| Protein: | ERF93_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 243 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERF93_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
188.0 | [0..22] | [243..15] |
|
Region A: Residues: [1-87] |
1 11 21 31 41 51
| | | | | |
1 MEYSQSSMYS SPSSWSSSQE SLLWNESCFL DQSSEPQAFF CPNYDYSDDF FSFESPEMMI 60
61 KEEIQNGDVS NSEEEEKVGI DEERSYR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [88-153] |
1 11 21 31 41 51
| | | | | |
1 GVRKRPWGKF AAEIRDSTRN GIRVWLGTFD KAEEAALAYD QAAFATKGSL ATLNFPVEVV 60
61 RESLKK
|
| Detection Method: | |
| Confidence: | 25.30103 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [154-243] |
1 11 21 31 41 51
| | | | | |
1 MENVNLHDGG SPVMALKRKH SLRNRPRGKK RSSSSSSSSS NSSSCSSSSS TSSTSRSSSK 60
61 QSVVKQESGT LVVFEDLGAE YLEQLLMSSC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.389 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.338 | c.51.1 | Anticodon-binding domain of Class II aaRS |
| View | Download | 0.329 | d.78.1 | RPB5-like RNA polymerase subunit |
| View | Download | 0.286 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.270 | c.51.1 | Anticodon-binding domain of Class II aaRS |
